Natalie Saini, Ph.D.
National Institute of Environmental Health Sciences
ABSTRACT
Accumulation of somatic mutations over the lifetime of an individual can be facilitated by genetic factors like impaired DNA repair pathways, and by exogenous DNA damaging agents. The large-scale cancer genome sequencing projects have demonstrated that mutation load and spectra in cancer genomes are characteristic of the cell and type tissue, location in the body, and environmental exposures. However, accurate measurements of lifetime accumulation of genetic changes attributable to these factors in healthy human cells are lacking. Previously, we demonstrated that mutation loads and spectra in the genomes of single skin fibroblast-derived clonal lineages from two healthy individuals resemble cancers. We showed that while, all samples carry CàT changes at CpG dinucleotides (the aging-associated mutation signature), cells from sun-exposed body sites carry a higher mutation burden with a predominant UV–induced mutation signature as compared to unexposed sites. Somatic mutation load also can be used as a measure of the ability of the cells to repair lesions. As such, we hypothesize that individuals with potentially deleterious polymorphisms in DNA repair genes, would have higher mutation loads and different mutational spectra than carriers of functional alleles. We have obtained DNA from >3000 individuals via the NIEHS Environmental Polymorphisms Registry. Amplification of potential DNA repair genes with asymmetric barcodes, and sequencing via the Pacific Biosciences single molecule real-time sequencing technology is used for identifying healthy individuals with common and rare deleterious alleles in the given gene. Sequencing single cell-derived clones from these individuals provides the range of mutation loads, and predominant mutation signatures attributable to defects in DNA repair pathways across a population.
Host: Kirill Lobachev, Ph.D.
Event Details
A unique treat awaits fans at the Yellow Jackets’ Jan. 22 men’s basketball home game. The Georgia Tech team will battle Notre Dame’s Fighting Irish for the hoops amid element cards, games, and prizes to celebrate 2019, the International Year of the Periodic Table of the Chemical Elements.
Born 150 years ago, the periodic table is one of the most important and recognizable tools of science. To celebrate the table’s staying power, the United Nations proclaimed 2019 as the International Year of the Periodic Table of Chemical Elements.
At Georgia Tech, the College of Sciences is leading an all-year-round celebration, #IYPT2019GT. It has partnered with other units to engage students, faculty, and staff in reconnecting with the periodic table, through athletics, art, and academics.
Kicking off the celebration is “The Periodic Table at Georgia Tech vs Notre Dame” men’s basketball match on Jan. 22. Partnering with Georgia Tech Athletics, the College of Sciences will bring #IYPT2019GT to McCamish Pavilion. Fans will have a chance to play games with the periodic table and element cards featuring the Yellow Jackets basketball team and Georgia Tech researchers. Prizes await lucky winners.
Admission is free to Georgia Tech students with a valid BuzzCard.
Discounted tickets are available to Georgia Tech faculty and staff here.
Parking for Fans and Visitors
To purchase guaranteed gameday parking in advance ($12 plus service fee), visit the Click and Park website. Cash payments ($15) are also accepted at each parking location listed below (attendants from Standard Parking Plus will be collecting parking fees).
Fans are allowed to park in E40, E52, ER55 (Fowler Street only), E63, E65, ER66 and W23. Click here for more information on parking zones. For weekend games, parking areas open four (4) hours before tipoff. For weekday games, parking areas open at 5:00 p.m.
Visitors who arrive before these areas open are welcome to park in the GT Hotel and Conference Center parking deck (E81) in Tech Square or in Visitors’ Area 6 at $1.50 per hour.
Please note the following regulations:
- Parking on sidewalks, lawns, green space or landscaped areas is prohibited.
- Vehicles found in violation will be subject to impoundment and fines.
Go Yellow Jackets!
Event Details
A Frontiers in Science Lecture to celebrate 2019, the International Year of the Periodic Table
The creation of the elements in the universe took billions of years and required various processes.
The first few minutes of the big bang produced only hydrogen (H) and helium (He). No new elements were formed until a few hundred million years later when the first generation of stars were born and they started fusing H and He into slightly higher-mass elements, such as carbon and oxygen. Various fusion reactions by multiple generations of stars eventually created elements up to iron (Fe).
However, normal stars cannot produce elements beyond Fe. Creation of elements heavier than Fe required the cataclysmic explosions of supernovas. These violent deaths of massive stars not only completed the natural elements in the periodic table. They also enabled human life, because certain life processes require heavy elements.
About the Speaker
James “Jim” Sowell is an astronomer at Georgia Tech and the director of the Georgia Tech Observatory. He has taught Georgia Tech’s two Introductory Astronomy courses for 27 years and the advanced Stellar Astrophysics course for 20 years.
He won the inaugural CETL Undergraduate Educator Award in 2009. He often performs public outreach and education, including the widely popular, monthly Public Nights at the Observatory; presentations at schools; and workshops for K-12 teachers. He developed the Aloha Telescope. This remotely controlled facility in Hawaii allows Atlanta area K-12 teachers and students to view live images of the Moon during regular school hours.
Sowell earned B.S. and M.S. degrees from Vanderbilt University and a Ph.D. from the University of Michigan. He joined Georgia Tech in 1989.
About Frontiers in Science Lectures
Lectures in this series are intended to inform, engage, and inspire students, faculty, staff, and the public on developments, breakthroughs, and topics of general interest in the sciences and mathematics. Lecturers tailor their talks for nonexpert audiences.
About the Periodic Table Frontiers in Science Lecture Series
Throughout 2019, the College of Sciences will bring prominent researchers from Georgia Tech and beyond to expound on little-discussed aspects of chemical elements:
- Feb. 6, James Sowell, How the Universe Made the Elements in the Periodic Table
- March 5, Michael Filler, Celebrating Silicon: Its Success, Hidden History, and Next Act
- April 2, John Baez, University of California, Riverside, Mathematical Mysteries of the Periodic Table
- April 18, Sam Kean, Author, The Periodic Table: A Treasure Trove of Passion, Adventure, Betrayal, and Obsession
- Sept. 12, Monica Halka, The Elusive End of the Periodic Table: Why Chase It?
- October, Taka Ito, Turning Sour, Bloated, and Out of Breath: Ocean Chemistry under Global Warming (This will take place on the Thursday of Homecoming Week 2019)
- Nov. 12, Margaret Kosal, The Geopolitics of Rare and Not-So-Rare Elements
Closest public parking is Visitors Area 2, on Ferst Street by the Student Center, http://pts.gatech.edu/visitors#l3
Refreshments served after every lecture
Event Details
Han Wang, Ph.D.
Division of Biology and Biological Engineering
California Institute of Technology
ABSTRACT
Sleep is a fundamental process that is essential for survival, but remains one of the most intriguing mysteries in biology. Sleep disorders in humans are prevalent and abnormal sleep can lead to adverse effects on neuronal function and contribute to various diseases. However, it is unclear how sleep is controlled at the molecular and circuit levels. By studying stress-induced sleep in C. elegans, I identified several novel sleep regulators and discovered a new mechanism underlying sleep regulation by neuropeptide signaling. I have also been developing genetic tools for systematic dissection of neural circuits for sleep in C. elegans. Specifically, I engineered a “cool” GAL4 to develop a bipartite cGAL system and its split derivative that allow unprecedented genetic access to the C. elegans nervous system at single neuron resolution. I am currently working on the characterization of novel sleep regulators and using the cGAL system for functional circuit mapping for sleep in C. elegans.
Host: Dr. Annalise Paaby
Event Details
Hillary Young, Ph.D.
Department of Ecology, Evolution, and Marine Biology
University of California, Santa Barbara
ABSTRACT
While we often think of the decline of wild animal life on our planet as merely a tragic consequence of other forms of global change, this defaunation is in fact a driver of global change in its own right, with cascading effects to ecosystem function. Here, I characterize the current Anthropocene defaunation event and, using a case study on zoonotic disease, explore how defaunation affects ecosystem function. Specifically I ask how we can understand the variability in these responses across environmental contexts in order to better predict and interrupt the negative functional consequences of this modern pulse of defaunation.
ABOUT THE SPEAKER
Hillary Young is a community ecologist in the department of Ecology, Evolution, and Marine Biology at UC Santa Barbara. Dr. Young received a B.A. degree in Ecology and Evolutionary Biology at Princeton University. She then received an M.A. in Environmental Management at Yale University where she focused on applied forest management questions. Her PhD in Biology at Stanford University examined cascading effects of changes in plant communities on whole ecosystem and community structure. As a postdoctoral researcher jointly affiliated at Smithsonian Institution and Harvard University she examined the impacts of anthropogenic disturbance on mammal communities and ultimately, on zoonotic diseases.
Host: Mark Hay, Ph.D.
Event Details
Yi Gu, Ph.D.
Princeton Neuroscience Institute
Princeton University
ABSTRACT
The ability of knowing where we are and finding our way during spatial navigation is closely associated with an “inner GPS” in the brain, the hippocampal-entorhinal circuit. The medial entorhinal cortex (MEC) contains “grid cells”, which have one of the most mysterious activity patterns in the brain, as their firing fields lie on a triangular lattice when animals navigate in an open arena. These grid cells together may serve as a coordinate system allowing precise positioning during navigation. Here I will present my study on grid cells in understanding the formation of their activity patterns and their roles in path integration. First, combining cellular-resolution two-photon imaging and virtual reality, I revealed a topographical map of grid cells in the mouse MEC according to their firing properties. This map contributes to a foundation for evaluating circuit models of grid cell network and is consistent with continuous attractor models as the mechanism of grid formation. Second, I discovered a novel cell type, “cue cell”, in the MEC. Cue cells specifically encode landmark information during virtual navigation and are potentially important for correcting errors in grid cell network during path integration. In my future laboratory, I will develop multifaceted research programs to understand the MEC in both health and disease at the circuit and molecular levels.
Event Details
Nathan Klapoetke, Ph.D.
HHMI
Janelia Research Campus
ABSTRACT
Nervous systems combine lower-level sensory signals to generate higher-order representations for guiding natural and voluntary behaviors. In this talk, I describe my research on how looming is encoded by the visual system to enable flies to identify and escape threats. I will also discuss how the fly visual system is able to compute object shapes and motion in general, and how the underlying neuronal architecture can support a broad range of visually guided natural behaviors.
Event Details
Shannon Stephens
School of Medicine
University of California, San Diego
ABSTRACT
Reproduction is comprised of many complex behavioral and physiological processes. My research examines how the brain controls reproductive physiology and behavior, focusing on the role of kisspeptin in regulating reproduction. Kisspeptin, encoded by Kiss1, is a potent stimulator of the reproductive axis and humans and mice with mutations in Kiss1 or its receptor, Kiss1r, have severe deficits in puberty onset, gonadal sex steroid hormone production, and fertility. Thus, kisspeptin is required for reproduction. Despite much research, the mechanisms regulating Kiss1 neurons and the reproductive axis have yet to be fully characterized. My early postdoctoral research examined the regulation and function of hypothalamic Kiss1 neurons, demonstrating that progesterone acts directly on kisspeptin neurons to regulate female fertility. My research also showed that treatment with corticosterone, a stress hormone, impaired female fertility and this was likely the result of reduced hypothalamic Kiss1 expression and Kiss1 neuronal activation in corticosterone-treated females. Kiss1 neurons are located primarily within the hypothalamus but are also detected in other brain areas, such as the medial amygdala (MeA). However, virtually nothing is known about the regulation and function of Kiss1 neurons in the MeA, which is the focus of my ongoing and future research. The amygdala is implicated in regulating reproduction, as well numerous other behavioral and physiological events such as stress, anxiety, and social behavior. Understanding the regulation and function of Kiss1 neurons in the MeA may provide valuable insight regarding how the amygdala modulates reproductive hormones and how amygdala-dependent behaviors, such as stress, can alter reproduction.
Event Details
Zizhen Wu, Ph.D.
Department of Neuroscience
John Hopkins University
ABSTRACT
Auditory hair cells contain mechanotransduction channels that rapidly open in response to sound-induced vibrations. We found that auditory hair cells contain two molecularly distinct mechanotransduction channels. One ion channel is activated by sound and is responsible for sensory transduction. This sensory transduction channel is expressed in hair cell stereocilia, and previous studies show that its activity is affected by mutations in the genes encoding the transmembrane proteins TMHS, TMIE, TMC1 and TMC2. We show here that the second ion channel is expressed at the apical surface of hair cells and that it contains the Piezo2 protein. The activity of the Piezo2-dependent channel is controlled by the intracellular Ca2+ concentration and can be recorded following disruption of the sensory transduction machinery or more generally by disruption of the sensory epithelium. We thus conclude that hair cells express two molecularly and functionally distinct mechanotransduction channels with different subcellular distributions.
Event Details
You could say that Avery Skye Zickar has Georgia Tech in her genes. Her mother, two uncles, and one brother are alumni. That affinity – and knowing that academics at Georgia Tech would be top-notch – cemented her decision to attend Tech after graduating from Hillgrove High School in Powder Springs, Georgia.
Avery comes from a family that highly values education. In high school, she took Advanced Placement courses for a taste of college academics. “They prepared me well for Georgia Tech by instilling a good work ethic and minimizing procrastination,” she says.
At Hillgrove High, Avery performed with the marching band and the wind symphony. She was also a horseback rider, participating in a few competitions but mostly riding recreationally. “Looking back,” she says, “I did a decent job of balancing my commitments to school, work, family, and friends.
Avery is graduating with a B.S. in Biochemistry and a minor in Biology. She tailored her academic program with the intent to continue her education in the medical field. Throughout her undergraduate years, she says, “the Institute made me feel right at home.”
What is the most important thing you learned at Georgia Tech?
Georgia Tech honed my ability to solve problems. Throughout my time at Tech, I’ve had to find solutions to problems with homework, exams, personal conflicts, and community-wide issues.
My problem-solving skills will serve me well when I enter the working world. I am confident in my ability to tackle whatever life throws at me, thanks to my time at Georgia Tech.
What are your proudest achievements at Georgia Tech?
I received a bid from Tau Beta Sigma, the National Honorary Band Service Sorority, during spring 2015. Through that organization, I participated in service projects to benefit the School of Music and the Atlanta community.
I served as teaching assistant (TA) for Introductory Biology and Organic Chemistry 2.
I worked as a student assistant in the School of Earth and Atmospheric Sciences’ office for over two years.
I was elected president of the Band Club and served the Georgia Tech Band program during the 2017-18 school year.
I was one of five finalists for Ms. Georgia Tech. Selection was based on interviews, grade point average, campus leadership, service, and love for the Institute.
These achievements contributed to my happiness and success at Tech.
Which professors or classes made a big impact on you?
I took CHEM 1211 and 1212 with Dr. Kimberly Schurmeier, who was also my advisor. She pushed me to be the best I can be in chemistry, even though I came to Tech without a strong chemistry background. She played in key role in my success in chemistry and in college.
Dr. Michael Evans helped me with Organic Chemistry 1, a well-known “weed out” course in my major. Although he wasn’t my professor, he went out of his way to help me understand the material.
Dr. Shana Kerr was also influential. She taught one of my favorite classes – Introduction to Organismal Biology. She was also the professor for the section of Biological Principles for which I was a TA in fall 2016. She taught me how to be an effective teacher, and I still use those concepts today.
I enjoyed working with Dr. Cameron Tyson as part of the BEST Study Abroad Program, first as a student and then as one of his TAs. A great professor, he taught us the foundations of Organic Chemistry 2. He also gave me a once-in-a-lifetime opportunity to teach in France!
Finally, I recognize the two teachers I’ve had every semester since day one: Chris Moore and B.J. Diden, my band directors. They are extremely supportive of my own and other band members’ endeavors, always pushing us to perform to our highest levels.
These wonderful people made a big impact on my life, and I’m very grateful for them.
What is your most vivid memory of Georgia Tech?
The Georgia Tech versus University of Georgia (UGA) football game in 2014.
We stood in Sanford Stadium, surrounded by red and black, just three points from moving into overtime. Harrison Butker (now a kicker for the Kansas City Chiefs) scored a field goal from 53 yards, tying the game and putting it into overtime.
The band players were screaming; the drum majors were scrambling for us to play the fight songs. Within minutes, the Yellow Jackets intercepted the ball from UGA, and the game ended.
The stadium fell silent, except for the sliver of Tech fans, who went wild.
We ran to the buses and got out of Athens fast. It was such an unforgettable moment. I think about that game every time I look at the score on my RAT cap.
In what ways did your time at Georgia Tech transform your life?
I became a well-rounded individual, one more prepared to tackle life than the person I was in high school.
The “real world” seemed daunting. I thought it meant having to take care of myself without help from anyone. Tech taught me not only how to solve problems, but also that that we don’t have to solve problems alone. We can rely on loved ones, family, friends, coworkers, or peers for support.
I met incredible people on campus, many of whom I call my friends. Nothing seems insurmountable with them by my side. I hope to maintain these relationships for the rest of my life.
What unique learning activities did you undertake?
I participated in the BEST Study Abroad Program in summer 2016, taking Organic Chemistry 2, Cell and Molecular Biology, and Synthesis Lab. The program is eight weeks long, and courses are taught at CPE-Lyon University, in Lyon, France. I got a second summer abroad, when I returned to Lyon as a TA.
Between studying and gallivanting across Europe, I had many great experiences and learned a lot. The world extends beyond the U.S. borders; there are so many wonderful people, cultures, and histories to discover.
I learned about myself and what I can overcome – such as balancing the “study” with the “abroad,” navigating the Paris Métro system, or fumbling through several languages just to order lunch.
I came back stronger, wiser, and better.
What advice would you give to incoming undergraduate students at Georgia Tech?After my first year at Tech, I posted on Facebook what I felt summed up my experience:
“Say hello. Don't be afraid. Challenge yourself. Meet one professor. Find a passion. Pursue your passion. Make a friend. Define your values. Care about your appearance. Take a chance. Follow your heart. Fall in love. Lend a hand. Join an organization. Find your sphere of influence. Lift the fallen. Monitor your actions. Fail. Cry. A lot. Get mad. Get driven. Strive for your goals. Succeed. Give thanks. Relax. Breathe. Say goodnight, not goodbye.”
I think that says it all.
Where are you headed after graduation?
I will continue to work as an emergency medical technician (EMT) to accrue patient care hours in preparation for physician assistant (PA) school. Most PA schools require at least 1,000 hours. While I log those hours, I plan to get my Advanced EMT (AEMT) certification, which allows me to place intravenous (IV) lines and give other medications to patients.
I’d love to work in obstetrics and gynecology as a PA. Georgia Tech helped me complete all the courses needed for PA school. It also gave me important life skills to be a successful PA – problem solving, working in groups, and one-on-one interactions, which were instilled in me at Tech.
Pages
